IsoGene Package
IsoGene is an R package for the analysis of dose-response microarray experiments to identify gene or subsets of genes with a monotone relationship between the gene expression and the doses. Several testing procedures (i.e., the likelihood ratio test, Williams, Marcus, the M, and Modified M), that take into account the order restriction of the means with respect
to the increasing doses are implemented in the package. The inference is based on resampling methods, both permutations and the Significance Analysis of Microarrays (SAM).
1. IsoGene package:
IsoGene package can be also downloaded from
The IsoGene can be installed directly within R by typing:
> install.packages("IsoGene", repos="http://R-Forge.R-project.org")
The IsoGene Project
Modeling Dose-Response Microarray Data in Early Drug Development Using R
